Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 AL732506.1-201ENSMUST00000226420 281 ntBASIC8.46□□□□□ -1.05
Herc2Q4U2R1 AC156501.1-201ENSMUST00000228219 270 ntBASIC8.46□□□□□ -1.05
Herc2Q4U2R1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc2Q4U2R1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Herc2Q4U2R1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Gm27552-201ENSMUST00000183351 62 ntBASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Gm27844-201ENSMUST00000183613 62 ntBASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Spcs1-203ENSMUST00000226374 592 ntBASIC8.46□□□□□ -1.06
Herc2Q4U2R1 AC126253.1-202ENSMUST00000226732 835 ntBASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC8.46□□□□□ -1.06
Herc2Q4U2R1 AA914427-201ENSMUST00000193194 1166 ntBASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc2Q4U2R1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm24548-201ENSMUST00000158650 108 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm13097-201ENSMUST00000210722 397 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm11340-201ENSMUST00000119226 412 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 AC123645.1-201ENSMUST00000228469 605 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm13464-201ENSMUST00000119418 935 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm23218-201ENSMUST00000158124 276 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm27772-201ENSMUST00000184900 187 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm42779-201ENSMUST00000198807 406 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm13408-201ENSMUST00000119822 798 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm13935-201ENSMUST00000121859 798 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm25545-201ENSMUST00000122673 323 ntBASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC8.45□□□□□ -1.06
Herc2Q4U2R1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms