Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Gm27437-201ENSMUST00000183429 107 ntBASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Dupd1-202ENSMUST00000224735 548 ntBASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prpf38aQ4FK66 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Gm45453-201ENSMUST00000211758 853 ntBASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Prpf38aQ4FK66 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38aQ4FK66 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38aQ4FK66 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38aQ4FK66 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38aQ4FK66 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Prpf38aQ4FK66 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Gm15653-201ENSMUST00000119247 907 ntBASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Prpf38aQ4FK66 Gm29340-201ENSMUST00000188763 3854 ntBASIC17■□□□□ 0.31
Prpf38aQ4FK66 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms