Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Gm8652-201ENSMUST00000181363 964 ntBASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Gm9182-201ENSMUST00000217829 639 ntBASIC14.59□□□□□ -0.07
Fam196aQ3USH1 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.59□□□□□ -0.07
Fam196aQ3USH1 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fam196aQ3USH1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Fam196aQ3USH1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Gm17795-201ENSMUST00000214505 757 ntBASIC14.58□□□□□ -0.08
Fam196aQ3USH1 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Fam196aQ3USH1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 BC001981-202ENSMUST00000191393 1545 ntBASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm16570-201ENSMUST00000161951 436 ntBASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm29649-201ENSMUST00000185649 419 ntBASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm5370-201ENSMUST00000187187 574 ntBASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm2495-201ENSMUST00000191160 466 ntBASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm6013-201ENSMUST00000212264 699 ntBASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Fam196aQ3USH1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Gm38241-201ENSMUST00000192641 898 ntBASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Gm7287-201ENSMUST00000205267 602 ntBASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Gm8463-201ENSMUST00000208573 613 ntBASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fam196aQ3USH1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms