Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Spg11Q3UHA3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Spg11Q3UHA3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Gm42997-202ENSMUST00000200321 985 ntBASIC13.31□□□□□ -0.28
Spg11Q3UHA3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.31□□□□□ -0.28
Spg11Q3UHA3 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Spg11Q3UHA3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm24255-201ENSMUST00000104481 128 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm11439-201ENSMUST00000118598 409 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm8227-201ENSMUST00000223306 571 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.3□□□□□ -0.28
Spg11Q3UHA3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Gm8213-201ENSMUST00000118191 441 ntBASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Gm18473-201ENSMUST00000220543 868 ntBASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Spg11Q3UHA3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms