Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Gm1401-201ENSMUST00000122048 772 ntBASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Gm27301-201ENSMUST00000184012 127 ntBASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Brf2Q3UAW9 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm2451-201ENSMUST00000199447 999 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm10290-201ENSMUST00000200451 999 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm5364-201ENSMUST00000216789 889 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Brf2Q3UAW9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Brf2Q3UAW9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms