Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.37□□□□□ -0.11
Q3KNL4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Gm7153-201ENSMUST00000117092 455 ntBASIC14.37□□□□□ -0.11
Q3KNL4 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.37□□□□□ -0.11
Q3KNL4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.37□□□□□ -0.11
Q3KNL4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Q3KNL4 Mir8098-201ENSMUST00000184011 137 ntBASIC14.37□□□□□ -0.11
Q3KNL4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
Q3KNL4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Q3KNL4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Q3KNL4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Q3KNL4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Q3KNL4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Q3KNL4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Gm23547-201ENSMUST00000158210 271 ntBASIC14.36□□□□□ -0.11
Q3KNL4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.36□□□□□ -0.11
Q3KNL4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Q3KNL4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.36□□□□□ -0.11
Q3KNL4 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.36□□□□□ -0.11
Q3KNL4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Q3KNL4 Gm10060-201ENSMUST00000212002 111 ntBASIC14.36□□□□□ -0.11
Q3KNL4 AV026068-213ENSMUST00000223675 1171 ntBASIC14.36□□□□□ -0.11
Q3KNL4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Q3KNL4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Q3KNL4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3KNL4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Q3KNL4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Q3KNL4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.35□□□□□ -0.11
Q3KNL4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Gm17971-201ENSMUST00000190239 806 ntBASIC14.35□□□□□ -0.11
Q3KNL4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.35□□□□□ -0.11
Q3KNL4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms