Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.59□□□□□ -0.07
Col6a2Q02788 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col6a2Q02788 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col6a2Q02788 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
Col6a2Q02788 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Col6a2Q02788 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Gm8749-201ENSMUST00000117737 331 ntBASIC14.58□□□□□ -0.08
Col6a2Q02788 Gm15693-201ENSMUST00000120470 637 ntBASIC14.58□□□□□ -0.08
Col6a2Q02788 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Gm27618-201ENSMUST00000183671 60 ntBASIC14.58□□□□□ -0.08
Col6a2Q02788 Gm27622-201ENSMUST00000183779 60 ntBASIC14.58□□□□□ -0.08
Col6a2Q02788 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.58□□□□□ -0.08
Col6a2Q02788 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Col6a2Q02788 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col6a2Q02788 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.57□□□□□ -0.08
Col6a2Q02788 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.57□□□□□ -0.08
Col6a2Q02788 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Gm17837-201ENSMUST00000186435 985 ntBASIC14.57□□□□□ -0.08
Col6a2Q02788 Gm18766-201ENSMUST00000189811 808 ntBASIC14.57□□□□□ -0.08
Col6a2Q02788 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.57□□□□□ -0.08
Col6a2Q02788 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col6a2Q02788 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col6a2Q02788 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.56□□□□□ -0.08
Col6a2Q02788 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.56□□□□□ -0.08
Col6a2Q02788 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col6a2Q02788 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a2Q02788 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
Col6a2Q02788 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms