Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Col1a2Q01149 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col1a2Q01149 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.17■□□□□ 0.5
Col1a2Q01149 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col1a2Q01149 Gm12585-201ENSMUST00000117307 290 ntBASIC18.17■□□□□ 0.5
Col1a2Q01149 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col1a2Q01149 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.17■□□□□ 0.5
Col1a2Q01149 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.17■□□□□ 0.5
Col1a2Q01149 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Col1a2Q01149 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Col1a2Q01149 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Col1a2Q01149 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.16■□□□□ 0.5
Col1a2Q01149 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.16■□□□□ 0.5
Col1a2Q01149 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col1a2Q01149 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Gm9797-201ENSMUST00000052902 613 ntBASIC18.16■□□□□ 0.5
Col1a2Q01149 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col1a2Q01149 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Col1a2Q01149 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.15■□□□□ 0.5
Col1a2Q01149 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col1a2Q01149 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.15■□□□□ 0.5
Col1a2Q01149 Gm15393-201ENSMUST00000120499 219 ntBASIC18.15■□□□□ 0.5
Col1a2Q01149 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.15■□□□□ 0.5
Col1a2Q01149 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.15■□□□□ 0.5
Col1a2Q01149 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.15■□□□□ 0.5
Col1a2Q01149 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.15■□□□□ 0.5
Col1a2Q01149 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col1a2Q01149 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Col1a2Q01149 Gm10766-202ENSMUST00000194123 606 ntBASIC18.15■□□□□ 0.5
Col1a2Q01149 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.15■□□□□ 0.5
Col1a2Q01149 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.15■□□□□ 0.5
Col1a2Q01149 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.15■□□□□ 0.5
Col1a2Q01149 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.15■□□□□ 0.5
Col1a2Q01149 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.15■□□□□ 0.5
Col1a2Q01149 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col1a2Q01149 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col1a2Q01149 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Col1a2Q01149 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Col1a2Q01149 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col1a2Q01149 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms