Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cacna1aP97445 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Gm13392-201ENSMUST00000117708 150 ntBASIC13.46□□□□□ -0.25
Cacna1aP97445 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.46□□□□□ -0.25
Cacna1aP97445 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.46□□□□□ -0.25
Cacna1aP97445 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cacna1aP97445 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.46□□□□□ -0.25
Cacna1aP97445 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.46□□□□□ -0.25
Cacna1aP97445 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.46□□□□□ -0.25
Cacna1aP97445 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.46□□□□□ -0.25
Cacna1aP97445 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.46□□□□□ -0.25
Cacna1aP97445 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Gm9797-201ENSMUST00000052902 613 ntBASIC13.46□□□□□ -0.25
Cacna1aP97445 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1aP97445 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1aP97445 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1aP97445 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1aP97445 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cacna1aP97445 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1aP97445 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1aP97445 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.45□□□□□ -0.26
Cacna1aP97445 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Gm9229-201ENSMUST00000222777 126 ntBASIC13.45□□□□□ -0.26
Cacna1aP97445 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cacna1aP97445 Gm38241-201ENSMUST00000192641 898 ntBASIC13.45□□□□□ -0.26
Cacna1aP97445 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.45□□□□□ -0.26
Cacna1aP97445 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Gm5035-201ENSMUST00000215581 927 ntBASIC13.45□□□□□ -0.26
Cacna1aP97445 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1aP97445 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.44□□□□□ -0.26
Cacna1aP97445 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.44□□□□□ -0.26
Cacna1aP97445 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.44□□□□□ -0.26
Cacna1aP97445 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Gm46209-201ENSMUST00000217912 553 ntBASIC13.44□□□□□ -0.26
Cacna1aP97445 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.44□□□□□ -0.26
Cacna1aP97445 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cacna1aP97445 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.44□□□□□ -0.26
Cacna1aP97445 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.44□□□□□ -0.26
Cacna1aP97445 Gm16570-201ENSMUST00000161951 436 ntBASIC13.44□□□□□ -0.26
Cacna1aP97445 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cacna1aP97445 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cacna1aP97445 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1aP97445 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms