Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pdlim4P70271 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pdlim4P70271 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim4P70271 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Gm15427-201ENSMUST00000117288 531 ntBASIC12.16□□□□□ -0.46
Pdlim4P70271 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.16□□□□□ -0.46
Pdlim4P70271 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.16□□□□□ -0.46
Pdlim4P70271 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.16□□□□□ -0.46
Pdlim4P70271 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Gm10175-201ENSMUST00000086013 645 ntBASIC12.16□□□□□ -0.46
Pdlim4P70271 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.16□□□□□ -0.46
Pdlim4P70271 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.16□□□□□ -0.46
Pdlim4P70271 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.16□□□□□ -0.46
Pdlim4P70271 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pdlim4P70271 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.15□□□□□ -0.46
Pdlim4P70271 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.15□□□□□ -0.46
Pdlim4P70271 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pdlim4P70271 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.15□□□□□ -0.46
Pdlim4P70271 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pdlim4P70271 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdlim4P70271 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pdlim4P70271 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms