Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Crnkl1P63154 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Crnkl1P63154 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Crnkl1P63154 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Crnkl1P63154 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.48□□□□□ -0.09
Crnkl1P63154 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.48□□□□□ -0.09
Crnkl1P63154 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.48□□□□□ -0.09
Crnkl1P63154 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.48□□□□□ -0.09
Crnkl1P63154 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Crnkl1P63154 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Crnkl1P63154 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.48□□□□□ -0.09
Crnkl1P63154 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.47□□□□□ -0.09
Crnkl1P63154 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Crnkl1P63154 Gm15165-201ENSMUST00000118140 502 ntBASIC14.47□□□□□ -0.09
Crnkl1P63154 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.47□□□□□ -0.09
Crnkl1P63154 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.47□□□□□ -0.09
Crnkl1P63154 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Crnkl1P63154 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Crnkl1P63154 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Crnkl1P63154 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.46□□□□□ -0.09
Crnkl1P63154 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Crnkl1P63154 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Crnkl1P63154 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.46□□□□□ -0.09
Crnkl1P63154 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.46□□□□□ -0.09
Crnkl1P63154 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Gm7153-201ENSMUST00000117092 455 ntBASIC14.46□□□□□ -0.09
Crnkl1P63154 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Crnkl1P63154 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.46□□□□□ -0.09
Crnkl1P63154 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Crnkl1P63154 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Crnkl1P63154 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Crnkl1P63154 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Crnkl1P63154 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Crnkl1P63154 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Crnkl1P63154 Acot6-202ENSMUST00000222921 3622 ntBASIC14.46□□□□□ -0.1
Crnkl1P63154 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Crnkl1P63154 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Crnkl1P63154 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Crnkl1P63154 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.45□□□□□ -0.1
Crnkl1P63154 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.45□□□□□ -0.1
Crnkl1P63154 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.45□□□□□ -0.1
Crnkl1P63154 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms