Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vamp3P63024 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vamp3P63024 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vamp3P63024 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vamp3P63024 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Vamp3P63024 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Vamp3P63024 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vamp3P63024 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Vamp3P63024 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Vamp3P63024 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.16□□□□□ -0.62
Vamp3P63024 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Vamp3P63024 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.16□□□□□ -0.62
Vamp3P63024 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.16□□□□□ -0.62
Vamp3P63024 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Cap2-205ENSMUST00000225824 1634 ntBASIC11.16□□□□□ -0.62
Vamp3P63024 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Vamp3P63024 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vamp3P63024 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Vamp3P63024 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Vamp3P63024 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vamp3P63024 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vamp3P63024 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vamp3P63024 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.15□□□□□ -0.62
Vamp3P63024 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.15□□□□□ -0.62
Vamp3P63024 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Vamp3P63024 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Vamp3P63024 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vamp3P63024 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
Vamp3P63024 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.15□□□□□ -0.62
Vamp3P63024 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.15□□□□□ -0.62
Vamp3P63024 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Vamp3P63024 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vamp3P63024 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vamp3P63024 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vamp3P63024 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Vamp3P63024 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vamp3P63024 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.14□□□□□ -0.63
Vamp3P63024 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.14□□□□□ -0.63
Vamp3P63024 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Vamp3P63024 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vamp3P63024 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Vamp3P63024 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.14□□□□□ -0.63
Vamp3P63024 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.14□□□□□ -0.63
Vamp3P63024 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.14□□□□□ -0.63
Vamp3P63024 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Vamp3P63024 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vamp3P63024 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms