Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ybx1P62960 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ybx1P62960 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Ybx1P62960 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ybx1P62960 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ybx1P62960 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.93□□□□□ -0.02
Ybx1P62960 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ybx1P62960 Gm14042-201ENSMUST00000120139 833 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.93□□□□□ -0.02
Ybx1P62960 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Gm23984-201ENSMUST00000157139 203 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.93□□□□□ -0.02
Ybx1P62960 Gm42612-201ENSMUST00000197986 623 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 Gm43170-201ENSMUST00000199827 612 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.93□□□□□ -0.02
Ybx1P62960 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.93□□□□□ -0.02
Ybx1P62960 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.93□□□□□ -0.02
Ybx1P62960 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.93□□□□□ -0.02
Ybx1P62960 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ybx1P62960 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ybx1P62960 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ybx1P62960 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ybx1P62960 Gm22189-201ENSMUST00000103822 86 ntBASIC14.92□□□□□ -0.02
Ybx1P62960 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.92□□□□□ -0.02
Ybx1P62960 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.92□□□□□ -0.02
Ybx1P62960 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.92□□□□□ -0.02
Ybx1P62960 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.92□□□□□ -0.02
Ybx1P62960 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.92□□□□□ -0.02
Ybx1P62960 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.92□□□□□ -0.02
Ybx1P62960 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.92□□□□□ -0.02
Ybx1P62960 Gm20445-201ENSMUST00000061905 565 ntBASIC14.92□□□□□ -0.02
Ybx1P62960 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ybx1P62960 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Efs-202ENSMUST00000227037 2540 ntBASIC14.92□□□□□ -0.02
Ybx1P62960 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ybx1P62960 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ybx1P62960 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ybx1P62960 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ybx1P62960 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.91□□□□□ -0.02
Ybx1P62960 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.91□□□□□ -0.02
Ybx1P62960 Gm15653-201ENSMUST00000119247 907 ntBASIC14.91□□□□□ -0.02
Ybx1P62960 Gm12138-201ENSMUST00000122180 951 ntBASIC14.91□□□□□ -0.02
Ybx1P62960 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Gm9522-201ENSMUST00000182394 926 ntBASIC14.91□□□□□ -0.02
Ybx1P62960 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.91□□□□□ -0.02
Ybx1P62960 Gm6745-201ENSMUST00000199216 526 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms