Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.81□□□□□ -0.36
Lsm6P62313 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Lsm6P62313 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.81□□□□□ -0.36
Lsm6P62313 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.81□□□□□ -0.36
Lsm6P62313 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Gm18206-201ENSMUST00000207027 926 ntBASIC12.81□□□□□ -0.36
Lsm6P62313 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.81□□□□□ -0.36
Lsm6P62313 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm6P62313 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm6P62313 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm6P62313 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.8□□□□□ -0.36
Lsm6P62313 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Lsm6P62313 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lsm6P62313 Gm14042-201ENSMUST00000120139 833 ntBASIC12.8□□□□□ -0.36
Lsm6P62313 Gm12260-201ENSMUST00000122447 411 ntBASIC12.8□□□□□ -0.36
Lsm6P62313 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Lsm6P62313 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Lsm6P62313 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Lsm6P62313 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Lsm6P62313 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 Mir3113-201ENSMUST00000175478 76 ntBASIC12.8□□□□□ -0.36
Lsm6P62313 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 Gm44492-201ENSMUST00000197012 141 ntBASIC12.8□□□□□ -0.36
Lsm6P62313 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.8□□□□□ -0.36
Lsm6P62313 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.8□□□□□ -0.36
Lsm6P62313 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm6P62313 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lsm6P62313 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm6P62313 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm6P62313 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm6P62313 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm6P62313 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms