Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrch1P62046 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrch1P62046 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrch1P62046 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Lrch1P62046 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lrch1P62046 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrch1P62046 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrch1P62046 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrch1P62046 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrch1P62046 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.12■□□□□ 0.33
Lrch1P62046 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.12■□□□□ 0.33
Lrch1P62046 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.12■□□□□ 0.33
Lrch1P62046 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Gm2495-201ENSMUST00000191160 466 ntBASIC17.12■□□□□ 0.33
Lrch1P62046 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Lrch1P62046 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrch1P62046 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lrch1P62046 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrch1P62046 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.11■□□□□ 0.33
Lrch1P62046 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.11■□□□□ 0.33
Lrch1P62046 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrch1P62046 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lrch1P62046 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lrch1P62046 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrch1P62046 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lrch1P62046 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.1■□□□□ 0.33
Lrch1P62046 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.1■□□□□ 0.33
Lrch1P62046 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Lrch1P62046 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.1■□□□□ 0.33
Lrch1P62046 Gm8463-201ENSMUST00000208573 613 ntBASIC17.1■□□□□ 0.33
Lrch1P62046 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.1■□□□□ 0.33
Lrch1P62046 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.1■□□□□ 0.33
Lrch1P62046 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrch1P62046 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Lrch1P62046 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Gm11814-201ENSMUST00000119515 929 ntBASIC17.09■□□□□ 0.33
Lrch1P62046 Gm43179-201ENSMUST00000198797 275 ntBASIC17.09■□□□□ 0.33
Lrch1P62046 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.09■□□□□ 0.33
Lrch1P62046 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.09■□□□□ 0.33
Lrch1P62046 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lrch1P62046 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.09■□□□□ 0.33
Lrch1P62046 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrch1P62046 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lrch1P62046 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Lrch1P62046 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrch1P62046 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrch1P62046 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lrch1P62046 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrch1P62046 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lrch1P62046 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Lrch1P62046 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Lrch1P62046 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Lrch1P62046 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrch1P62046 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrch1P62046 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lrch1P62046 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms