Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm16026-204ENSMUST00000162652 683 ntBASIC14.92□□□□□ -0.02
Tubgcp3P58854 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.92□□□□□ -0.02
Tubgcp3P58854 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tubgcp3P58854 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.91□□□□□ -0.02
Tubgcp3P58854 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm8749-201ENSMUST00000117737 331 ntBASIC14.91□□□□□ -0.02
Tubgcp3P58854 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm23547-201ENSMUST00000158210 271 ntBASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm9727-201ENSMUST00000161387 555 ntBASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm17968-201ENSMUST00000194902 784 ntBASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tubgcp3P58854 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Gm9726-201ENSMUST00000180321 678 ntBASIC14.9□□□□□ -0.02
Tubgcp3P58854 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.9□□□□□ -0.02
Tubgcp3P58854 Gm27301-201ENSMUST00000184012 127 ntBASIC14.9□□□□□ -0.02
Tubgcp3P58854 Gm45747-201ENSMUST00000212203 999 ntBASIC14.9□□□□□ -0.02
Tubgcp3P58854 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.9□□□□□ -0.02
Tubgcp3P58854 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.9□□□□□ -0.02
Tubgcp3P58854 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Tubgcp3P58854 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.89□□□□□ -0.03
Tubgcp3P58854 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.89□□□□□ -0.03
Tubgcp3P58854 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.89□□□□□ -0.03
Tubgcp3P58854 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms