Protein–RNA interactions for Protein: P52734

Fgd1, FYVE, RhoGEF and PH domain-containing protein 1, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fgd1P52734 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Gm38197-201ENSMUST00000192320 2122 ntBASIC18.82■□□□□ 0.6
Fgd1P52734 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.82■□□□□ 0.6
Fgd1P52734 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.82■□□□□ 0.6
Fgd1P52734 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fgd1P52734 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Fgd1P52734 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.81■□□□□ 0.6
Fgd1P52734 Gm43321-201ENSMUST00000198897 2409 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Fgd1P52734 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Fgd1P52734 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.81■□□□□ 0.6
Fgd1P52734 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.81■□□□□ 0.6
Fgd1P52734 Gm43767-201ENSMUST00000198933 381 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.81■□□□□ 0.6
Fgd1P52734 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fgd1P52734 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.8■□□□□ 0.6
Fgd1P52734 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.8■□□□□ 0.6
Fgd1P52734 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Gm27525-201ENSMUST00000184465 107 ntBASIC18.8■□□□□ 0.6
Fgd1P52734 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fgd1P52734 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Fgd1P52734 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Fgd1P52734 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Fgd1P52734 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Fgd1P52734 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.79■□□□□ 0.6
Fgd1P52734 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Fgd1P52734 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.79■□□□□ 0.6
Fgd1P52734 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Fgd1P52734 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fgd1P52734 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms