Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx2-1P50220 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.13□□□□□ -0.47
Nkx2-1P50220 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx2-1P50220 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.12□□□□□ -0.47
Nkx2-1P50220 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.12□□□□□ -0.47
Nkx2-1P50220 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Gm15372-201ENSMUST00000120729 834 ntBASIC12.12□□□□□ -0.47
Nkx2-1P50220 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.12□□□□□ -0.47
Nkx2-1P50220 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.12□□□□□ -0.47
Nkx2-1P50220 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-1P50220 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.11□□□□□ -0.47
Nkx2-1P50220 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.11□□□□□ -0.47
Nkx2-1P50220 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Gm12497-201ENSMUST00000138778 237 ntBASIC12.11□□□□□ -0.47
Nkx2-1P50220 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms