Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm15358-201ENSMUST00000119249 520 ntBASIC12.82□□□□□ -0.36
GdnfP48540 Gm7862-201ENSMUST00000121461 292 ntBASIC12.82□□□□□ -0.36
GdnfP48540 Gm15173-201ENSMUST00000122049 433 ntBASIC12.82□□□□□ -0.36
GdnfP48540 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.82□□□□□ -0.36
GdnfP48540 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.82□□□□□ -0.36
GdnfP48540 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.82□□□□□ -0.36
GdnfP48540 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GdnfP48540 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
GdnfP48540 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.81□□□□□ -0.36
GdnfP48540 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.81□□□□□ -0.36
GdnfP48540 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GdnfP48540 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GdnfP48540 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
GdnfP48540 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.81□□□□□ -0.36
GdnfP48540 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.81□□□□□ -0.36
GdnfP48540 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Gm28659-201ENSMUST00000188013 759 ntBASIC12.81□□□□□ -0.36
GdnfP48540 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Gm7461-201ENSMUST00000058918 827 ntBASIC12.81□□□□□ -0.36
GdnfP48540 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.81□□□□□ -0.36
GdnfP48540 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
GdnfP48540 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
GdnfP48540 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GdnfP48540 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
GdnfP48540 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.8□□□□□ -0.36
GdnfP48540 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.8□□□□□ -0.36
GdnfP48540 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
GdnfP48540 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.8□□□□□ -0.36
GdnfP48540 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.8□□□□□ -0.36
GdnfP48540 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.8□□□□□ -0.36
GdnfP48540 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.8□□□□□ -0.36
GdnfP48540 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.8□□□□□ -0.36
GdnfP48540 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GdnfP48540 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.8□□□□□ -0.36
GdnfP48540 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GdnfP48540 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
GdnfP48540 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GdnfP48540 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
GdnfP48540 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms