Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.28□□□□□ -0.12
Gli1P47806 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.28□□□□□ -0.12
Gli1P47806 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Mir8117-201ENSMUST00000184773 107 ntBASIC14.28□□□□□ -0.12
Gli1P47806 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.28□□□□□ -0.12
Gli1P47806 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.28□□□□□ -0.12
Gli1P47806 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gli1P47806 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.28□□□□□ -0.12
Gli1P47806 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gli1P47806 Gm15358-201ENSMUST00000119249 520 ntBASIC14.27□□□□□ -0.13
Gli1P47806 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.27□□□□□ -0.13
Gli1P47806 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.27□□□□□ -0.13
Gli1P47806 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Gli1P47806 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.27□□□□□ -0.13
Gli1P47806 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gli1P47806 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Gli1P47806 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gli1P47806 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gli1P47806 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Gli1P47806 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.26□□□□□ -0.13
Gli1P47806 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.26□□□□□ -0.13
Gli1P47806 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.26□□□□□ -0.13
Gli1P47806 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.26□□□□□ -0.13
Gli1P47806 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gli1P47806 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.26□□□□□ -0.13
Gli1P47806 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gli1P47806 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Gli1P47806 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Gli1P47806 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.25□□□□□ -0.13
Gli1P47806 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms