Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gm15487-201ENSMUST00000122373 465 ntBASIC12.17□□□□□ -0.46
Abca1P41233 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gm9824-201ENSMUST00000178707 561 ntBASIC12.17□□□□□ -0.46
Abca1P41233 Gm27920-201ENSMUST00000183953 96 ntBASIC12.17□□□□□ -0.46
Abca1P41233 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Abca1P41233 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Abca1P41233 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
Abca1P41233 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Abca1P41233 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.17□□□□□ -0.46
Abca1P41233 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.17□□□□□ -0.46
Abca1P41233 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.17□□□□□ -0.46
Abca1P41233 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Abca1P41233 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Abca1P41233 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.17□□□□□ -0.46
Abca1P41233 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.17□□□□□ -0.46
Abca1P41233 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Abca1P41233 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Abca1P41233 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Abca1P41233 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.16□□□□□ -0.46
Abca1P41233 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Abca1P41233 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.16□□□□□ -0.46
Abca1P41233 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.16□□□□□ -0.46
Abca1P41233 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Abca1P41233 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.16□□□□□ -0.46
Abca1P41233 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.16□□□□□ -0.46
Abca1P41233 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Abca1P41233 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Abca1P41233 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Abca1P41233 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Abca1P41233 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Abca1P41233 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Abca1P41233 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Abca1P41233 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Abca1P41233 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms