Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.99□□□□□ -0.17
Cdh4P39038 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh4P39038 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.98□□□□□ -0.17
Cdh4P39038 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Cdh4P39038 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.98□□□□□ -0.17
Cdh4P39038 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Cdh4P39038 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh4P39038 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh4P39038 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdh4P39038 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cdh4P39038 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Cdh4P39038 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Cdh4P39038 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdh4P39038 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh4P39038 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdh4P39038 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.98□□□□□ -0.17
Cdh4P39038 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdh4P39038 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdh4P39038 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh4P39038 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh4P39038 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Cdh4P39038 Gm8749-201ENSMUST00000117737 331 ntBASIC13.97□□□□□ -0.17
Cdh4P39038 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdh4P39038 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdh4P39038 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Mir6990-201ENSMUST00000183724 91 ntBASIC13.97□□□□□ -0.17
Cdh4P39038 Gm27920-201ENSMUST00000183953 96 ntBASIC13.97□□□□□ -0.17
Cdh4P39038 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.97□□□□□ -0.17
Cdh4P39038 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.97□□□□□ -0.17
Cdh4P39038 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cdh4P39038 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdh4P39038 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh4P39038 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.96□□□□□ -0.17
Cdh4P39038 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdh4P39038 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Cdh4P39038 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Cdh4P39038 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdh4P39038 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Cdh4P39038 Gm44335-201ENSMUST00000196879 141 ntBASIC13.96□□□□□ -0.17
Cdh4P39038 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Gm44297-201ENSMUST00000198304 141 ntBASIC13.96□□□□□ -0.17
Cdh4P39038 Gm44346-201ENSMUST00000198851 141 ntBASIC13.96□□□□□ -0.17
Cdh4P39038 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms