Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LdlrP35951 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.54□□□□□ -0.08
LdlrP35951 Mir3113-201ENSMUST00000175478 76 ntBASIC14.54□□□□□ -0.08
LdlrP35951 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.54□□□□□ -0.08
LdlrP35951 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
LdlrP35951 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.54□□□□□ -0.08
LdlrP35951 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.54□□□□□ -0.08
LdlrP35951 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LdlrP35951 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LdlrP35951 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
LdlrP35951 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LdlrP35951 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.53□□□□□ -0.08
LdlrP35951 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LdlrP35951 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.53□□□□□ -0.08
LdlrP35951 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.53□□□□□ -0.08
LdlrP35951 Gm18489-201ENSMUST00000172565 551 ntBASIC14.53□□□□□ -0.08
LdlrP35951 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.53□□□□□ -0.08
LdlrP35951 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.53□□□□□ -0.08
LdlrP35951 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.53□□□□□ -0.08
LdlrP35951 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.53□□□□□ -0.08
LdlrP35951 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LdlrP35951 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.53□□□□□ -0.08
LdlrP35951 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LdlrP35951 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.52□□□□□ -0.08
LdlrP35951 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.52□□□□□ -0.08
LdlrP35951 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LdlrP35951 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LdlrP35951 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LdlrP35951 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LdlrP35951 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LdlrP35951 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LdlrP35951 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LdlrP35951 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LdlrP35951 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LdlrP35951 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.52□□□□□ -0.09
LdlrP35951 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.52□□□□□ -0.09
LdlrP35951 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.52□□□□□ -0.09
LdlrP35951 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.52□□□□□ -0.09
LdlrP35951 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.52□□□□□ -0.09
LdlrP35951 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LdlrP35951 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms