Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.51□□□□□ -0.25
Thbs1P35441 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Gm6754-201ENSMUST00000117124 913 ntBASIC13.51□□□□□ -0.25
Thbs1P35441 Gm14042-201ENSMUST00000120139 833 ntBASIC13.51□□□□□ -0.25
Thbs1P35441 Gm11594-201ENSMUST00000122313 162 ntBASIC13.51□□□□□ -0.25
Thbs1P35441 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Thbs1P35441 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Gm27301-201ENSMUST00000184012 127 ntBASIC13.51□□□□□ -0.25
Thbs1P35441 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Thbs1P35441 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.51□□□□□ -0.25
Thbs1P35441 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.5□□□□□ -0.25
Thbs1P35441 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.5□□□□□ -0.25
Thbs1P35441 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Thbs1P35441 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Thbs1P35441 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.5□□□□□ -0.25
Thbs1P35441 Gm9727-201ENSMUST00000161387 555 ntBASIC13.5□□□□□ -0.25
Thbs1P35441 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Thbs1P35441 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Thbs1P35441 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.5□□□□□ -0.25
Thbs1P35441 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.5□□□□□ -0.25
Thbs1P35441 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Gm9182-201ENSMUST00000217829 639 ntBASIC13.5□□□□□ -0.25
Thbs1P35441 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.5□□□□□ -0.25
Thbs1P35441 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.5□□□□□ -0.25
Thbs1P35441 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Thbs1P35441 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Thbs1P35441 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Thbs1P35441 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Thbs1P35441 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Thbs1P35441 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.49□□□□□ -0.25
Thbs1P35441 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.49□□□□□ -0.25
Thbs1P35441 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Thbs1P35441 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.49□□□□□ -0.25
Thbs1P35441 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.49□□□□□ -0.25
Thbs1P35441 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.49□□□□□ -0.25
Thbs1P35441 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Thbs1P35441 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Thbs1P35441 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thbs1P35441 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Thbs1P35441 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms