Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col2a1P28481 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col2a1P28481 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.38■□□□□ 0.21
Col2a1P28481 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.38■□□□□ 0.21
Col2a1P28481 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Col2a1P28481 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.38■□□□□ 0.21
Col2a1P28481 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Col2a1P28481 Mir7654-201ENSMUST00000185082 70 ntBASIC16.38■□□□□ 0.21
Col2a1P28481 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.38■□□□□ 0.21
Col2a1P28481 Gm45384-201ENSMUST00000210451 277 ntBASIC16.38■□□□□ 0.21
Col2a1P28481 Gm17795-201ENSMUST00000214505 757 ntBASIC16.38■□□□□ 0.21
Col2a1P28481 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col2a1P28481 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col2a1P28481 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.38■□□□□ 0.21
Col2a1P28481 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col2a1P28481 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.38■□□□□ 0.21
Col2a1P28481 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.38■□□□□ 0.21
Col2a1P28481 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col2a1P28481 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col2a1P28481 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col2a1P28481 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Col2a1P28481 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.37■□□□□ 0.21
Col2a1P28481 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.37■□□□□ 0.21
Col2a1P28481 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.37■□□□□ 0.21
Col2a1P28481 Gm9908-201ENSMUST00000211534 448 ntBASIC16.37■□□□□ 0.21
Col2a1P28481 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.37■□□□□ 0.21
Col2a1P28481 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.37■□□□□ 0.21
Col2a1P28481 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Col2a1P28481 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.37■□□□□ 0.21
Col2a1P28481 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col2a1P28481 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.36■□□□□ 0.21
Col2a1P28481 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Gm27701-201ENSMUST00000184498 110 ntBASIC16.36■□□□□ 0.21
Col2a1P28481 Gm18905-201ENSMUST00000205454 928 ntBASIC16.36■□□□□ 0.21
Col2a1P28481 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.36■□□□□ 0.21
Col2a1P28481 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Col2a1P28481 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col2a1P28481 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Col2a1P28481 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col2a1P28481 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.36■□□□□ 0.21
Col2a1P28481 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.36■□□□□ 0.21
Col2a1P28481 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col2a1P28481 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Col2a1P28481 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col2a1P28481 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Col2a1P28481 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col2a1P28481 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.36■□□□□ 0.21
Col2a1P28481 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.35■□□□□ 0.21
Col2a1P28481 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.35■□□□□ 0.21
Col2a1P28481 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.35■□□□□ 0.21
Col2a1P28481 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.35■□□□□ 0.21
Col2a1P28481 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Gm13385-201ENSMUST00000121089 220 ntBASIC16.35■□□□□ 0.21
Col2a1P28481 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.35■□□□□ 0.21
Col2a1P28481 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms