Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cd40lgP27548 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40lgP27548 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40lgP27548 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40lgP27548 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40lgP27548 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40lgP27548 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd40lgP27548 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cd40lgP27548 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40lgP27548 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.48□□□□□ -0.25
Cd40lgP27548 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Cd40lgP27548 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.48□□□□□ -0.25
Cd40lgP27548 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cd40lgP27548 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.48□□□□□ -0.25
Cd40lgP27548 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Gm13597-201ENSMUST00000121239 375 ntBASIC13.47□□□□□ -0.25
Cd40lgP27548 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.47□□□□□ -0.25
Cd40lgP27548 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cd40lgP27548 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.46□□□□□ -0.25
Cd40lgP27548 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.46□□□□□ -0.25
Cd40lgP27548 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms