Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Gm13453-201ENSMUST00000118708 357 ntBASIC16.88■□□□□ 0.29
Usp53P15975 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.88■□□□□ 0.29
Usp53P15975 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Gm27306-201ENSMUST00000183970 107 ntBASIC16.88■□□□□ 0.29
Usp53P15975 Gm9182-201ENSMUST00000217829 639 ntBASIC16.88■□□□□ 0.29
Usp53P15975 Shd-206ENSMUST00000225145 998 ntBASIC16.88■□□□□ 0.29
Usp53P15975 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Usp53P15975 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Usp53P15975 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp53P15975 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.87■□□□□ 0.29
Usp53P15975 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Gm27989-201ENSMUST00000184721 107 ntBASIC16.87■□□□□ 0.29
Usp53P15975 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.87■□□□□ 0.29
Usp53P15975 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Usp53P15975 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.87■□□□□ 0.29
Usp53P15975 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.87■□□□□ 0.29
Usp53P15975 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Usp53P15975 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp53P15975 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.86■□□□□ 0.29
Usp53P15975 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Usp53P15975 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Gm24543-201ENSMUST00000103867 82 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Usp53P15975 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Gm25144-201ENSMUST00000179561 110 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Gm25352-201ENSMUST00000179815 110 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.86■□□□□ 0.29
Usp53P15975 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Usp53P15975 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.86■□□□□ 0.29
Usp53P15975 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Usp53P15975 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Usp53P15975 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp53P15975 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp53P15975 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms