Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccl3P10855 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccl3P10855 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ccl3P10855 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Ccl3P10855 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.85□□□□□ -0.35
Ccl3P10855 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl3P10855 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccl3P10855 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccl3P10855 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccl3P10855 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccl3P10855 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccl3P10855 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccl3P10855 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccl3P10855 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Ccl3P10855 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl3P10855 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ccl3P10855 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Ccl3P10855 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ccl3P10855 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ccl3P10855 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Ccl3P10855 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccl3P10855 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccl3P10855 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccl3P10855 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.83□□□□□ -0.36
Ccl3P10855 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccl3P10855 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccl3P10855 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.83□□□□□ -0.36
Ccl3P10855 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccl3P10855 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccl3P10855 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccl3P10855 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccl3P10855 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccl3P10855 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccl3P10855 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccl3P10855 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccl3P10855 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ccl3P10855 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccl3P10855 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ccl3P10855 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms