Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hoxc6P10629 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 Gm15393-201ENSMUST00000120499 219 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hoxc6P10629 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Gm5354-201ENSMUST00000182417 973 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.13■□□□□ 0.17
Hoxc6P10629 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.13■□□□□ 0.17
Hoxc6P10629 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.13■□□□□ 0.17
Hoxc6P10629 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Hoxc6P10629 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc6P10629 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Gm15460-201ENSMUST00000118147 391 ntBASIC16.12■□□□□ 0.17
Hoxc6P10629 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Gm27701-201ENSMUST00000184498 110 ntBASIC16.12■□□□□ 0.17
Hoxc6P10629 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Gm5035-201ENSMUST00000215581 927 ntBASIC16.12■□□□□ 0.17
Hoxc6P10629 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.12■□□□□ 0.17
Hoxc6P10629 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.12■□□□□ 0.17
Hoxc6P10629 Gm9899-201ENSMUST00000065519 555 ntBASIC16.12■□□□□ 0.17
Hoxc6P10629 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hoxc6P10629 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc6P10629 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hoxc6P10629 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Hoxc6P10629 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.11■□□□□ 0.17
Hoxc6P10629 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.11■□□□□ 0.17
Hoxc6P10629 Gm10275-202ENSMUST00000168697 495 ntBASIC16.11■□□□□ 0.17
Hoxc6P10629 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.11■□□□□ 0.17
Hoxc6P10629 Gm10275-201ENSMUST00000092620 635 ntBASIC16.11■□□□□ 0.17
Hoxc6P10629 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hoxc6P10629 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hoxc6P10629 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hoxc6P10629 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hoxc6P10629 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hoxc6P10629 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hoxc6P10629 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.1■□□□□ 0.17
Hoxc6P10629 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hoxc6P10629 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.1■□□□□ 0.17
Hoxc6P10629 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms