Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gm10566-201ENSMUST00000086739 996 ntBASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.05□□□□□ -0.8
Smim1P0C8K7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Gm43767-201ENSMUST00000198933 381 ntBASIC10.04□□□□□ -0.8
Smim1P0C8K7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.04□□□□□ -0.8
Smim1P0C8K7 Timm23-208ENSMUST00000226683 750 ntBASIC10.04□□□□□ -0.8
Smim1P0C8K7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.04□□□□□ -0.8
Smim1P0C8K7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smim1P0C8K7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smim1P0C8K7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smim1P0C8K7 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.04□□□□□ -0.8
Smim1P0C8K7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Gm10849-201ENSMUST00000100397 618 ntBASIC10.03□□□□□ -0.8
Smim1P0C8K7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Smim1P0C8K7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms