Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm13616-201ENSMUST00000120600 222 ntBASIC14.36□□□□□ -0.11
Hoxa4P06798 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hoxa4P06798 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxa4P06798 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxa4P06798 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxa4P06798 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa4P06798 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxa4P06798 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Gm25144-201ENSMUST00000179561 110 ntBASIC14.35□□□□□ -0.11
Hoxa4P06798 Gm25352-201ENSMUST00000179815 110 ntBASIC14.35□□□□□ -0.11
Hoxa4P06798 Gm28630-201ENSMUST00000187806 498 ntBASIC14.35□□□□□ -0.11
Hoxa4P06798 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.35□□□□□ -0.11
Hoxa4P06798 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.35□□□□□ -0.11
Hoxa4P06798 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxa4P06798 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Hoxa4P06798 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa4P06798 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.35□□□□□ -0.11
Hoxa4P06798 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa4P06798 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Gm9719-201ENSMUST00000162765 543 ntBASIC14.34□□□□□ -0.11
Hoxa4P06798 Gm22175-201ENSMUST00000175007 78 ntBASIC14.34□□□□□ -0.11
Hoxa4P06798 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxa4P06798 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Gm44872-201ENSMUST00000207864 420 ntBASIC14.34□□□□□ -0.11
Hoxa4P06798 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxa4P06798 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa4P06798 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa4P06798 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Hoxa4P06798 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa4P06798 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa4P06798 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa4P06798 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa4P06798 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.33□□□□□ -0.11
Hoxa4P06798 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.33□□□□□ -0.12
Hoxa4P06798 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm12882-201ENSMUST00000121696 517 ntBASIC14.33□□□□□ -0.12
Hoxa4P06798 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa4P06798 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa4P06798 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms