Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm7774-201ENSMUST00000200064 533 ntBASIC13.03□□□□□ -0.32
P06344 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.03□□□□□ -0.32
P06344 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.03□□□□□ -0.32
P06344 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.03□□□□□ -0.32
P06344 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
P06344 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06344 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06344 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06344 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06344 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
P06344 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P06344 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.02□□□□□ -0.33
P06344 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.02□□□□□ -0.33
P06344 Gm38225-201ENSMUST00000194001 393 ntBASIC13.02□□□□□ -0.33
P06344 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.02□□□□□ -0.33
P06344 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06344 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
P06344 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.02□□□□□ -0.33
P06344 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.01□□□□□ -0.33
P06344 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.01□□□□□ -0.33
P06344 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Gm15920-201ENSMUST00000118998 402 ntBASIC13.01□□□□□ -0.33
P06344 Gm13464-201ENSMUST00000119418 935 ntBASIC13.01□□□□□ -0.33
P06344 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.01□□□□□ -0.33
P06344 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.01□□□□□ -0.33
P06344 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.01□□□□□ -0.33
P06344 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.01□□□□□ -0.33
P06344 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.01□□□□□ -0.33
P06344 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
P06344 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
P06344 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P06344 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.01□□□□□ -0.33
P06344 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.01□□□□□ -0.33
P06344 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.01□□□□□ -0.33
P06344 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.01□□□□□ -0.33
P06344 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
P06344 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06344 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.01□□□□□ -0.33
P06344 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
P06344 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06344 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P06344 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06344 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Gm43205-201ENSMUST00000198622 1968 ntBASIC13□□□□□ -0.33
P06344 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P06344 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13□□□□□ -0.33
P06344 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
P06344 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06344 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06344 Fgf17-202ENSMUST00000227123 1336 ntBASIC13□□□□□ -0.33
P06344 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13□□□□□ -0.33
P06344 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13□□□□□ -0.33
P06344 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06344 Gm23547-201ENSMUST00000158210 271 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms