Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P04224 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
P04224 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P04224 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.84□□□□□ -0.35
P04224 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
P04224 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.84□□□□□ -0.35
P04224 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.84□□□□□ -0.35
P04224 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
P04224 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
P04224 Acot6-202ENSMUST00000222921 3622 ntBASIC12.84□□□□□ -0.35
P04224 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.84□□□□□ -0.35
P04224 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Gm15794-201ENSMUST00000120182 631 ntBASIC12.84□□□□□ -0.35
P04224 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
P04224 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
P04224 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.84□□□□□ -0.35
P04224 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
P04224 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P04224 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P04224 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.83□□□□□ -0.35
P04224 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P04224 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
P04224 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
P04224 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
P04224 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.83□□□□□ -0.36
P04224 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Rprl3-201ENSMUST00000157400 290 ntBASIC12.83□□□□□ -0.36
P04224 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Gm9172-201ENSMUST00000212092 954 ntBASIC12.83□□□□□ -0.36
P04224 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.83□□□□□ -0.36
P04224 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
P04224 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
P04224 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.83□□□□□ -0.36
P04224 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
P04224 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
P04224 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
P04224 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.82□□□□□ -0.36
P04224 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P04224 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms