Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxa3P02831 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxa3P02831 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxa3P02831 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.27□□□□□ -0.45
Hoxa3P02831 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxa3P02831 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxa3P02831 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.26□□□□□ -0.45
Hoxa3P02831 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Gm44872-201ENSMUST00000207864 420 ntBASIC12.26□□□□□ -0.45
Hoxa3P02831 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.26□□□□□ -0.45
Hoxa3P02831 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.26□□□□□ -0.45
Hoxa3P02831 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa3P02831 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa3P02831 Celf4-206ENSMUST00000224553 1729 ntBASIC12.25□□□□□ -0.45
Hoxa3P02831 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 AA543401-201ENSMUST00000164248 1269 ntBASIC12.25□□□□□ -0.45
Hoxa3P02831 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.25□□□□□ -0.45
Hoxa3P02831 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.25□□□□□ -0.45
Hoxa3P02831 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.25□□□□□ -0.45
Hoxa3P02831 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.25□□□□□ -0.45
Hoxa3P02831 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.25□□□□□ -0.45
Hoxa3P02831 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa3P02831 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa3P02831 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxa3P02831 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa3P02831 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa3P02831 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxa3P02831 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa3P02831 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa3P02831 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms