Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
TcraP01849 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
TcraP01849 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.68□□□□□ -0.7
TcraP01849 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
TcraP01849 Gm5587-201ENSMUST00000206270 674 ntBASIC10.68□□□□□ -0.7
TcraP01849 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
TcraP01849 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.68□□□□□ -0.7
TcraP01849 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
TcraP01849 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
TcraP01849 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TcraP01849 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
TcraP01849 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TcraP01849 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TcraP01849 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.67□□□□□ -0.7
TcraP01849 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
TcraP01849 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.67□□□□□ -0.7
TcraP01849 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.67□□□□□ -0.7
TcraP01849 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
TcraP01849 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TcraP01849 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.66□□□□□ -0.7
TcraP01849 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.66□□□□□ -0.7
TcraP01849 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.66□□□□□ -0.7
TcraP01849 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.66□□□□□ -0.7
TcraP01849 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
TcraP01849 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
TcraP01849 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
TcraP01849 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TcraP01849 Gm11950-201ENSMUST00000121615 838 ntBASIC10.66□□□□□ -0.7
TcraP01849 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms