Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.98■□□□□ 0.63
Apaf1O88879 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Apaf1O88879 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.97■□□□□ 0.63
Apaf1O88879 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Apaf1O88879 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.97■□□□□ 0.63
Apaf1O88879 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Apaf1O88879 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Apaf1O88879 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Apaf1O88879 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.97■□□□□ 0.63
Apaf1O88879 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Apaf1O88879 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.96■□□□□ 0.63
Apaf1O88879 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Apaf1O88879 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.96■□□□□ 0.63
Apaf1O88879 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.96■□□□□ 0.63
Apaf1O88879 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.96■□□□□ 0.63
Apaf1O88879 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.96■□□□□ 0.63
Apaf1O88879 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Apaf1O88879 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.96■□□□□ 0.63
Apaf1O88879 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Apaf1O88879 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Apaf1O88879 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Gm27622-201ENSMUST00000183779 60 ntBASIC18.95■□□□□ 0.62
Apaf1O88879 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.95■□□□□ 0.62
Apaf1O88879 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.95■□□□□ 0.62
Apaf1O88879 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.95■□□□□ 0.62
Apaf1O88879 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Apaf1O88879 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.95■□□□□ 0.62
Apaf1O88879 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Apaf1O88879 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.94■□□□□ 0.62
Apaf1O88879 Gm5566-201ENSMUST00000116118 459 ntBASIC18.94■□□□□ 0.62
Apaf1O88879 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.94■□□□□ 0.62
Apaf1O88879 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Apaf1O88879 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Apaf1O88879 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Apaf1O88879 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms