Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldn1O88551 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldn1O88551 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cldn1O88551 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.54□□□□□ -0.4
Cldn1O88551 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cldn1O88551 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.54□□□□□ -0.4
Cldn1O88551 Gm23984-201ENSMUST00000157139 203 ntBASIC12.54□□□□□ -0.4
Cldn1O88551 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cldn1O88551 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Gm27533-201ENSMUST00000183800 152 ntBASIC12.54□□□□□ -0.4
Cldn1O88551 Gm27680-201ENSMUST00000184192 160 ntBASIC12.54□□□□□ -0.4
Cldn1O88551 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.54□□□□□ -0.4
Cldn1O88551 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.54□□□□□ -0.4
Cldn1O88551 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cldn1O88551 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn1O88551 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn1O88551 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.53□□□□□ -0.4
Cldn1O88551 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.53□□□□□ -0.4
Cldn1O88551 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.53□□□□□ -0.4
Cldn1O88551 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn1O88551 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn1O88551 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cldn1O88551 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Cldn1O88551 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn1O88551 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn1O88551 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn1O88551 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn1O88551 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn1O88551 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Cldn1O88551 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Cldn1O88551 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn1O88551 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn1O88551 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cldn1O88551 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn1O88551 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Cldn1O88551 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.52□□□□□ -0.41
Cldn1O88551 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.52□□□□□ -0.41
Cldn1O88551 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Gm12138-201ENSMUST00000122180 951 ntBASIC12.52□□□□□ -0.41
Cldn1O88551 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Gm27920-201ENSMUST00000183953 96 ntBASIC12.52□□□□□ -0.41
Cldn1O88551 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.52□□□□□ -0.41
Cldn1O88551 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cldn1O88551 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Cldn1O88551 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Cldn1O88551 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn1O88551 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cldn1O88551 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.51□□□□□ -0.41
Cldn1O88551 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn1O88551 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn1O88551 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms