Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm26095-201ENSMUST00000179270 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm22171-201ENSMUST00000179283 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm23936-201ENSMUST00000179354 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm22619-201ENSMUST00000179516 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm25255-201ENSMUST00000179579 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24755-201ENSMUST00000179691 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm26506-201ENSMUST00000179692 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm25086-201ENSMUST00000179931 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm23243-201ENSMUST00000180047 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24659-201ENSMUST00000180212 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm24169-201ENSMUST00000180244 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm23689-201ENSMUST00000180354 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm27359-201ENSMUST00000184153 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm27785-201ENSMUST00000184268 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm27466-201ENSMUST00000184396 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm27703-201ENSMUST00000184836 110 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Gm43474-201ENSMUST00000196415 774 ntBASIC14.43□□□□□ -0.1
Pdlim1O70400 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim1O70400 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Pdlim1O70400 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pdlim1O70400 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.42□□□□□ -0.1
Pdlim1O70400 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.42□□□□□ -0.1
Pdlim1O70400 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim1O70400 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim1O70400 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim1O70400 Gm5312-201ENSMUST00000203728 547 ntBASIC14.42□□□□□ -0.1
Pdlim1O70400 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.42□□□□□ -0.1
Pdlim1O70400 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Pdlim1O70400 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pdlim1O70400 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pdlim1O70400 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.42□□□□□ -0.1
Pdlim1O70400 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pdlim1O70400 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pdlim1O70400 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Pdlim1O70400 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.41□□□□□ -0.1
Pdlim1O70400 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim1O70400 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.41□□□□□ -0.1
Pdlim1O70400 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdlim1O70400 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdlim1O70400 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdlim1O70400 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.41□□□□□ -0.1
Pdlim1O70400 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.41□□□□□ -0.1
Pdlim1O70400 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdlim1O70400 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pdlim1O70400 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdlim1O70400 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms