Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rdh5O55240 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rdh5O55240 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Rdh5O55240 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh5O55240 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.84□□□□□ -0.19
Rdh5O55240 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.84□□□□□ -0.19
Rdh5O55240 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Rdh5O55240 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rdh5O55240 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rdh5O55240 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rdh5O55240 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.83□□□□□ -0.2
Rdh5O55240 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.83□□□□□ -0.2
Rdh5O55240 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.83□□□□□ -0.2
Rdh5O55240 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rdh5O55240 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.83□□□□□ -0.2
Rdh5O55240 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Gm23547-201ENSMUST00000158210 271 ntBASIC13.83□□□□□ -0.2
Rdh5O55240 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Rdh5O55240 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.83□□□□□ -0.2
Rdh5O55240 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Gm2451-201ENSMUST00000199447 999 ntBASIC13.83□□□□□ -0.2
Rdh5O55240 Gm10290-201ENSMUST00000200451 999 ntBASIC13.83□□□□□ -0.2
Rdh5O55240 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.83□□□□□ -0.2
Rdh5O55240 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rdh5O55240 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rdh5O55240 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.83□□□□□ -0.2
Rdh5O55240 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Rdh5O55240 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh5O55240 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rdh5O55240 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rdh5O55240 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rdh5O55240 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Rdh5O55240 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rdh5O55240 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.82□□□□□ -0.2
Rdh5O55240 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rdh5O55240 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.82□□□□□ -0.2
Rdh5O55240 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rdh5O55240 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Rdh5O55240 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rdh5O55240 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rdh5O55240 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rdh5O55240 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rdh5O55240 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rdh5O55240 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.81□□□□□ -0.2
Rdh5O55240 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.81□□□□□ -0.2
Rdh5O55240 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rdh5O55240 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms