Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ercc2O08811 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Gm12134-201ENSMUST00000122109 520 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Gm14822-201ENSMUST00000122247 291 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.95□□□□□ -0.02
Ercc2O08811 Rprl2-201ENSMUST00000157150 290 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Gm27397-201ENSMUST00000184997 107 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.95□□□□□ -0.02
Ercc2O08811 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.95□□□□□ -0.02
Ercc2O08811 Gm9182-201ENSMUST00000217829 639 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.95□□□□□ -0.02
Ercc2O08811 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ercc2O08811 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Ercc2O08811 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.94□□□□□ -0.02
Ercc2O08811 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ercc2O08811 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ercc2O08811 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.94□□□□□ -0.02
Ercc2O08811 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.94□□□□□ -0.02
Ercc2O08811 Gm13365-201ENSMUST00000121188 973 ntBASIC14.94□□□□□ -0.02
Ercc2O08811 Mir1895-201ENSMUST00000122615 79 ntBASIC14.94□□□□□ -0.02
Ercc2O08811 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.94□□□□□ -0.02
Ercc2O08811 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.94□□□□□ -0.02
Ercc2O08811 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.94□□□□□ -0.02
Ercc2O08811 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.94□□□□□ -0.02
Ercc2O08811 Gm37230-201ENSMUST00000194491 818 ntBASIC14.94□□□□□ -0.02
Ercc2O08811 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ercc2O08811 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
Ercc2O08811 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ercc2O08811 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.94□□□□□ -0.02
Ercc2O08811 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.94□□□□□ -0.02
Ercc2O08811 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Ercc2O08811 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ercc2O08811 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ercc2O08811 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.93□□□□□ -0.02
Ercc2O08811 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.93□□□□□ -0.02
Ercc2O08811 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ercc2O08811 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ercc2O08811 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.93□□□□□ -0.02
Ercc2O08811 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ercc2O08811 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Ercc2O08811 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ercc2O08811 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ercc2O08811 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.93□□□□□ -0.02
Ercc2O08811 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ercc2O08811 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ercc2O08811 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ercc2O08811 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.93□□□□□ -0.02
Ercc2O08811 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ercc2O08811 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ercc2O08811 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ercc2O08811 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ercc2O08811 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms