Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.18■□□□□ 0.02
Ebf3O08791 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.18■□□□□ 0.02
Ebf3O08791 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ebf3O08791 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.18■□□□□ 0.02
Ebf3O08791 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.18■□□□□ 0.02
Ebf3O08791 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.18■□□□□ 0.02
Ebf3O08791 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ebf3O08791 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.18■□□□□ 0.02
Ebf3O08791 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ebf3O08791 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ebf3O08791 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ebf3O08791 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf3O08791 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Ebf3O08791 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ebf3O08791 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf3O08791 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ebf3O08791 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ebf3O08791 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ebf3O08791 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.17■□□□□ 0.02
Ebf3O08791 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.17■□□□□ 0.02
Ebf3O08791 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.17■□□□□ 0.02
Ebf3O08791 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.17■□□□□ 0.02
Ebf3O08791 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.17■□□□□ 0.02
Ebf3O08791 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ebf3O08791 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.16■□□□□ 0.02
Ebf3O08791 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
Ebf3O08791 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.16■□□□□ 0.02
Ebf3O08791 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Ebf3O08791 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ebf3O08791 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.16■□□□□ 0.02
Ebf3O08791 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ebf3O08791 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.16■□□□□ 0.02
Ebf3O08791 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ebf3O08791 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ebf3O08791 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ebf3O08791 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ebf3O08791 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.15■□□□□ 0.02
Ebf3O08791 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ebf3O08791 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.15■□□□□ 0.02
Ebf3O08791 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.15■□□□□ 0.02
Ebf3O08791 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ebf3O08791 Gm18766-201ENSMUST00000189811 808 ntBASIC15.15■□□□□ 0.02
Ebf3O08791 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ebf3O08791 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms