Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm22065-201ENSMUST00000103753 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm22066-201ENSMUST00000103761 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24932-201ENSMUST00000103763 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24115-201ENSMUST00000103799 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm22190-201ENSMUST00000103827 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm22191-201ENSMUST00000103831 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24721-201ENSMUST00000103849 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm28018-201ENSMUST00000103869 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm26399-201ENSMUST00000103937 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm25349-201ENSMUST00000177728 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm23616-201ENSMUST00000177797 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm25871-201ENSMUST00000177816 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24752-201ENSMUST00000178240 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24496-201ENSMUST00000178287 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm25649-201ENSMUST00000178476 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm25548-201ENSMUST00000178681 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm23147-201ENSMUST00000178841 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm26095-201ENSMUST00000179270 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm22171-201ENSMUST00000179283 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm23936-201ENSMUST00000179354 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm22619-201ENSMUST00000179516 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm25255-201ENSMUST00000179579 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24755-201ENSMUST00000179691 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm26506-201ENSMUST00000179692 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm25086-201ENSMUST00000179931 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm23243-201ENSMUST00000180047 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24659-201ENSMUST00000180212 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm24169-201ENSMUST00000180244 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm23689-201ENSMUST00000180354 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm27359-201ENSMUST00000184153 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm27785-201ENSMUST00000184268 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm27466-201ENSMUST00000184396 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm27703-201ENSMUST00000184836 110 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.69■□□□□ 0.1
Usp35M0QWN7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp35M0QWN7 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.68■□□□□ 0.1
Usp35M0QWN7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Gm7774-201ENSMUST00000200064 533 ntBASIC15.68■□□□□ 0.1
Usp35M0QWN7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.68■□□□□ 0.1
Usp35M0QWN7 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.68■□□□□ 0.1
Usp35M0QWN7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.68■□□□□ 0.1
Usp35M0QWN7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Gm37660-201ENSMUST00000192754 1732 ntBASIC15.68■□□□□ 0.1
Usp35M0QWN7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp35M0QWN7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Gm25287-201ENSMUST00000103846 110 ntBASIC15.67■□□□□ 0.1
Usp35M0QWN7 Gm22918-201ENSMUST00000103855 110 ntBASIC15.67■□□□□ 0.1
Usp35M0QWN7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Usp35M0QWN7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms