Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
B020004C17RikJ3QP07 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Gm15240-201ENSMUST00000118156 720 ntBASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Gm44608-201ENSMUST00000206827 855 ntBASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
B020004C17RikJ3QP07 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
B020004C17RikJ3QP07 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
B020004C17RikJ3QP07 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms