Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Gm9109-201ENSMUST00000120254 1405 ntBASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 AC154687.2-201ENSMUST00000223853 640 ntBASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcf11G3X9Z4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Gm19078-201ENSMUST00000206311 727 ntBASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Gm5356-201ENSMUST00000093326 615 ntBASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcf11G3X9Z4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Gm11524-201ENSMUST00000119349 807 ntBASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Gm17150-201ENSMUST00000165577 381 ntBASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcf11G3X9Z4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Gm15806-201ENSMUST00000120696 955 ntBASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcf11G3X9Z4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcf11G3X9Z4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcf11G3X9Z4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
Pcf11G3X9Z4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Gm6266-201ENSMUST00000203844 806 ntBASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Gm18905-201ENSMUST00000205454 928 ntBASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcf11G3X9Z4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms