Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm12390-201ENSMUST00000117897 397 ntBASIC17.52■□□□□ 0.4
NpcdF8VQB8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.52■□□□□ 0.4
NpcdF8VQB8 Gm45453-201ENSMUST00000211758 853 ntBASIC17.52■□□□□ 0.4
NpcdF8VQB8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NpcdF8VQB8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.51■□□□□ 0.39
NpcdF8VQB8 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.51■□□□□ 0.39
NpcdF8VQB8 Gm17794-201ENSMUST00000220252 955 ntBASIC17.51■□□□□ 0.39
NpcdF8VQB8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Gm10478-201ENSMUST00000084451 396 ntBASIC17.51■□□□□ 0.39
NpcdF8VQB8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NpcdF8VQB8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Snora78-201ENSMUST00000158630 128 ntBASIC17.5■□□□□ 0.39
NpcdF8VQB8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.5■□□□□ 0.39
NpcdF8VQB8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.5■□□□□ 0.39
NpcdF8VQB8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.5■□□□□ 0.39
NpcdF8VQB8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Gm5356-201ENSMUST00000093326 615 ntBASIC17.5■□□□□ 0.39
NpcdF8VQB8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.5■□□□□ 0.39
NpcdF8VQB8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NpcdF8VQB8 App-207ENSMUST00000227737 2827 ntBASIC17.49■□□□□ 0.39
NpcdF8VQB8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.49■□□□□ 0.39
NpcdF8VQB8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.49■□□□□ 0.39
NpcdF8VQB8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NpcdF8VQB8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms