Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh9F8VPK8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh9F8VPK8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh9F8VPK8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh9F8VPK8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh9F8VPK8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh9F8VPK8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh9F8VPK8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Gm2272-201ENSMUST00000194903 582 ntBASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdh9F8VPK8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdh9F8VPK8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Gm14042-201ENSMUST00000120139 833 ntBASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Gm13597-201ENSMUST00000121239 375 ntBASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms