Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm340F6RGI3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm340F6RGI3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm340F6RGI3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm340F6RGI3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm340F6RGI3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm340F6RGI3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm340F6RGI3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm5177-201ENSMUST00000183092 997 ntBASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm340F6RGI3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.16□□□□□ -0.14
Gm340F6RGI3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Gm340F6RGI3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.16□□□□□ -0.14
Gm340F6RGI3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm340F6RGI3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Gm16198-201ENSMUST00000118766 670 ntBASIC14.15□□□□□ -0.14
Gm340F6RGI3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Gm43514-201ENSMUST00000198852 424 ntBASIC14.15□□□□□ -0.14
Gm340F6RGI3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.15□□□□□ -0.14
Gm340F6RGI3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.15□□□□□ -0.14
Gm340F6RGI3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.15□□□□□ -0.14
Gm340F6RGI3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm340F6RGI3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms