Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Gm38341-201ENSMUST00000195357 515 ntBASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Gm37008-201ENSMUST00000195712 319 ntBASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Gm19078-201ENSMUST00000206311 727 ntBASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc85cE9Q6B2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Gm13216-201ENSMUST00000117145 591 ntBASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Gm13612-201ENSMUST00000119276 390 ntBASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc85cE9Q6B2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm22018-201ENSMUST00000104357 131 ntBASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm22902-201ENSMUST00000158488 302 ntBASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm43138-201ENSMUST00000199123 708 ntBASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc85cE9Q6B2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Gm11524-201ENSMUST00000119349 807 ntBASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc85cE9Q6B2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.79■□□□□ 0.44
Ccdc85cE9Q6B2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc85cE9Q6B2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms