Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Gm18473-201ENSMUST00000220543 868 ntBASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Mir686-201ENSMUST00000102174 109 ntBASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Gm26927-201ENSMUST00000182385 965 ntBASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Gm19208-201ENSMUST00000213861 912 ntBASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a3E9PWQ3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Gm18905-201ENSMUST00000205454 928 ntBASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Gm7600-201ENSMUST00000209657 785 ntBASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 Gm25517-201ENSMUST00000083865 134 ntBASIC14.3□□□□□ -0.12
Col6a3E9PWQ3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Col6a3E9PWQ3 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms