Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.18□□□□□ -0.14
Clip3B9EHT4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gm13365-201ENSMUST00000121188 973 ntBASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gm11745-201ENSMUST00000121669 448 ntBASIC14.18□□□□□ -0.14
Clip3B9EHT4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.18□□□□□ -0.14
Clip3B9EHT4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clip3B9EHT4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.17□□□□□ -0.14
Clip3B9EHT4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.17□□□□□ -0.14
Clip3B9EHT4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.17□□□□□ -0.14
Clip3B9EHT4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Clip3B9EHT4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Rpph1-201ENSMUST00000175096 319 ntBASIC14.16□□□□□ -0.14
Clip3B9EHT4 Gm20553-201ENSMUST00000204205 844 ntBASIC14.16□□□□□ -0.14
Clip3B9EHT4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.16□□□□□ -0.14
Clip3B9EHT4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.16□□□□□ -0.14
Clip3B9EHT4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clip3B9EHT4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.15□□□□□ -0.14
Clip3B9EHT4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms